Divergence directory (fundamental departure/mean) from Ka and you may Ks calculated in accordance with the eight various methods in the several vertebrate variety
About boxplots, straight down quantile, average, and higher quantile was indeed portrayed regarding packages. Imply opinions have been represented inside the dots. Outliers was eliminated to really make the spot straightforward. The quantity rules on vertebrate varieties are: 1, chimp; dos, orangutan; step three, macaque; 4, horse; 5, dog; 6, cow; 7, guinea pig; 8, mouse; nine, rat; 10, opossum; eleven, platypus; and you can twelve, chicken.
The portion of shared genetics away from Ka, Ks and you may Ka/Ks considering GY in contrast to almost every other 7 tips when it comes out https://datingranking.net/happn-vs-tinder/ of clipped-of (An excellent, B), means (C, D), and you will species (E, F). Outliers were removed to really make the plots of land straightforward. The amount codes for the varieties are identical since the what in Figure step 1.
It results suggested you to definitely its Ka viewpoints haven’t reached saturation yet
The methods used in this study cover a wide range of mutation models with different complexities. Read more →